INDRA CoGEx 1.0.0 Documentation
Getting Started
- License and funding
- Enrichment and Set Analysis
- INDRA CoGEx modules reference
- INDRA CoGEx Knowledge Assembly (
indra_cogex.assembly) - INDRA CoGEx Client
- Indexing of The Database
- INDRA CoGEx Sources
- Source CLI (
indra_cogex.sources.cli) - INDRA CoGEx Sources Processor (
indra_cogex.sources.processor) - Data Validation (
indra_cogex.sources.processor_util) - Bgee Processor (
indra_cogex.sources.bgee) - cBioPortal Processor (
indra_cogex.sources.cbioportal) - CellMarker Processor (
indra_cogex.sources.cellmarker) - chembl Processor (
indra_cogex.sources.chembl) - clinicaltrials Processor (
indra_cogex.sources.clinicaltrials) - DisGeNet Processor (
indra_cogex.sources.disgenet) - HGNCEnzyme Processor (
indra_cogex.sources.ec) - goa Processor (
indra_cogex.sources.goa) - GWAS Processor (
indra_cogex.sources.gwas) - HPOA Processor (
indra_cogex.sources.hpoa) - INDRA DB Processor (
indra_cogex.sources.indra_db) - INDRA Ontology Processor (
indra_cogex.sources.indra_ontology) - InterPro Processor (
indra_cogex.sources.interpro) - NIH RePORTER Processor (
indra_cogex.sources.nih_reporter) - Odinson Processor (
indra_cogex.sources.odinson) - Pathways Processor (
indra_cogex.sources.pathways) - PubMed Processor (
indra_cogex.sources.pubmed) - Sider Processor (
indra_cogex.sources.sider) - WikiData Processor (
indra_cogex.sources.wikidata)
- Source CLI (
- INDRA CoGEx Representation (
indra_cogex.representation)
- INDRA CoGEx Knowledge Assembly (